Joshua Vogelstein: search on Z-Library

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1

Towards Neurosubtypes in Autism

Hong, Seok-Jun, Vogelstein, Joshua T., Gozzi, Alessandro, Bernhardt, Boris C., Yeo, B.T. Thomas, Milham, Michael P., Di Martino, Adriana

Journal:

Biological Psychiatry

Year:

2020

File:

PDF, 1021 KB

2020

2

Imaging human connectomes at the macroscale

Craddock, R Cameron, Jbabdi, Saad, Yan, Chao-Gan, Vogelstein, Joshua T, Castellanos, F Xavier, Di Martino, Adriana, Kelly, Clare, Heberlein, Keith, Colcombe, Stan, Milham, Michael P

Journal:

Year:

2013

Language:

english

File:

PDF, 2.21 MB

english, 2013

3

Differential connectivity and response dynamics of excitatory and inhibitory neurons in visual cortex

Hofer, Sonja B, Ko, Ho, Pichler, Bruno, Vogelstein, Joshua, Ros, Hana, Zeng, Hongkui, Lein, Ed, Lesica, Nicholas A, Mrsic-Flogel, Thomas D

Journal:

Nature Neuroscience

Year:

2011

Language:

english

File:

PDF, 1.58 MB

english, 2011

4

Q&A: What is the Open Connectome Project?

Joshua T Vogelstein

Journal:

Neural Systems & Circuits

Year:

2011

Language:

english

File:

PDF, 147 KB

english, 2011

5

Optimizing the Quantity/Quality Trade-Off in Connectome Inference

Priebe, Carey E., Vogelstein, Joshua, Bock, Davi

Journal:

Communication in Statistics- Theory and Methods

Year:

2013

Language:

english

File:

PDF, 172 KB

english, 2013

6

Multichannel Electrophysiological Spike Sorting via Joint Dictionary Learning and Mixture Modeling

Carlson, David E., Vogelstein, Joshua T., Qisong Wu,, Wenzhao Lian,, Mingyuan Zhou,, Stoetzner, Colin R., Kipke, Daryl, Weber, Douglas, Dunson, David B., Carin, Lawrence

Journal:

IEEE Transactions on Biomedical Engineering

Year:

2014

Language:

english

File:

PDF, 929 KB

english, 2014

7

Dynamically Reconfigurable Silicon Array of Spiking Neurons With Conductance-Based Synapses

Vogelstein, R. Jacob, Mallik, Udayan, Vogelstein, Joshua T., Cauwenberghs, Gert

Journal:

IEEE Transactions on Neural Networks

Year:

2007

Language:

english

File:

PDF, 1.70 MB

english, 2007

8

[IEEE 2013 18th International Conference on Digital Signal Processing (DSP) - Fira, Santorini, Greece (2013.07.1-2013.07.3)] 2013 18th International Conference on Digital Signal Processing (DSP) - Bayesian crack detection in ultra high resolution multimodal images of paintings

Cornelis, Bruno, Yang, Yun, Vogelstein, Joshua T., Dooms, Ann, Daubechies, Ingrid, Dunson, David

Year:

2013

Language:

english

File:

PDF, 8.10 MB

english, 2013

9

Graph Matching: Relax at Your Own Risk

Lyzinski, Vince, Fishkind, Donniell E., Fiori, Marcelo, Vogelstein, Joshua T., Priebe, Carey E., Sapiro, Guillermo

Journal:

IEEE Transactions on Pattern Analysis and Machine Intelligence

Year:

2016

Language:

english

File:

PDF, 1.39 MB

english, 2016

10

D elta C on

Koutra, Danai, Shah, Neil, Vogelstein, Joshua T., Gallagher, Brian, Faloutsos, Christos

Journal:

ACM Transactions on Knowledge Discovery from Data

Year:

2016

Language:

english

File:

PDF, 2.57 MB

english, 2016

11

Semi-External Memory Sparse Matrix Multiplication for Billion-Node Graphs

Zheng, Da, Mhembere, Disa, Lyzinski, Vince, Vogelstein, Joshua, Priebe, Carey E., Burns, Randal

Journal:

IEEE Transactions on Parallel and Distributed Systems

Year:

2016

Language:

english

File:

PDF, 731 KB

english, 2016

12

Detection of aneuploidy in patients with cancer through amplification of long interspersed nucleotide elements (LINEs)

Douville, Christopher, Springer, Simeon, Kinde, Isaac, Cohen, Joshua D., Hruban, Ralph H., Lennon, Anne Marie, Papadopoulos, Nickolas, Kinzler, Kenneth W., Vogelstein, Bert, Karchin, Rachel

Journal:

Proceedings of the National Academy of Sciences

Year:

2018

Language:

english

File:

PDF, 742 KB

english, 2018

13

From Distance Correlation to Multiscale Graph Correlation

Shen, Cencheng, Priebe, Carey E., Vogelstein, Joshua T.

Journal:

Journal of the American Statistical Association

Year:

2018

Language:

english

File:

PDF, 868 KB

english, 2018

14

A new look at state-space models for neural data

Liam Paninski, Yashar Ahmadian, Daniel Gil Ferreira, Shinsuke Koyama, Kamiar Rahnama Rad, Michael Vidne, Joshua Vogelstein, Wei Wu

Journal:

Journal of Computational Neuroscience

Year:

2010

Language:

english

File:

PDF, 782 KB

english, 2010

15

Accumulated Clonal Genetic Alterations in Familial and Sporadic Colorectal Carcinomas with Widespread Instability in Microsatellite Sequences

Takato Fujiwara, Joshua M. Stolker, Toshiaki Watanabe, Asif Rashid, Patti Longo, James R. Eshleman, Susan Booker, Henry T. Lynch, Jeremy R. Jass, Jane S. Green, Hoguen Kim, Jin Jen, Bert Vogelstein, S

Journal:

The American Journal of Pathology

Year:

1998

Language:

english

File:

PDF, 1.57 MB

english, 1998

16

Spike Inference from Calcium Imaging Using Sequential Monte Carlo Methods

Vogelstein, Joshua T., Watson, Brendon O., Packer, Adam M., Yuste, Rafael, Jedynak, Bruno, Paninski, Liam

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 888 KB

english, 2009

17

Accurate prediction of AD patients using cortical thickness networks

Dai, Dai, He, Huiguang, Vogelstein, Joshua T., Hou, Zengguang

Journal:

Machine Vision and Applications

Year:

2013

Language:

english

File:

PDF, 1010 KB

english, 2013

18

From Cosmos to Connectomes: The Evolution of Data-Intensive Science

Burns, Randal, Vogelstein, Joshua T., Szalay, Alexander S.

Journal:

Year:

2014

Language:

english

File:

PDF, 421 KB

english, 2014

19

[IEEE 2013 IEEE Global Conference on Signal and Information Processing (GlobalSIP) - Austin, TX, USA (2013.12.3-2013.12.5)] 2013 IEEE Global Conference on Signal and Information Processing - MIGRAINE: MRI Graph Reliability Analysis and Inference for Connectomics

Gray Roncal, William, Koterba, Zachary H., Mhembere, Disa, Kleissas, Dean M., Vogelstein, Joshua T., Burns, Randal, Bowles, Anita R., Donavos, Dimitrios K., Ryman, Sephira, Jung, Rex E., Wu, Lei, Calh

Year:

2013

Language:

english

File:

PDF, 3.78 MB

english, 2013

20

Consistent Adjacency-Spectral Partitioning for the Stochastic Block Model When the Model Parameters Are Unknown

Fishkind, Donniell E., Sussman, Daniel L., Tang, Minh, Vogelstein, Joshua T., Priebe, Carey E.

Journal:

SIAM Journal on Matrix Analysis and Applications

Year:

2013

Language:

english

File:

PDF, 394 KB

english, 2013

21

[ACM Press the 25th International Conference - Baltimore, Maryland (2013.07.29-2013.07.31)] Proceedings of the 25th International Conference on Scientific and Statistical Database Management - SSDBM - The open connectome project data cluster

Burns, Randal, Kasthuri, Narayanan, Kazhdan, Michael, Smith, Stephen J., Kleissas, Dean, Perlman, Eric, Chung, Kwanghun, Weiler, Nicholas C., Lichtman, Jeff, Szalay, Alexander S., Vogelstein, Joshua T

Year:

2013

Language:

english

File:

PDF, 2.21 MB

english, 2013

22

Shuffled Graph Classification: Theory and Connectome Applications

Vogelstein, Joshua T., Priebe, Carey E.

Journal:

Journal of Classification

Year:

2015

Language:

english

File:

PDF, 336 KB

english, 2015

23

A BAYESIAN APPROACH FOR INFERRING NEURONAL CONNECTIVITY FROM CALCIUM FLUORESCENT IMAGING DATA

Yuriy Mishchencko, Joshua T. Vogelstein and Liam Paninski

Journal:

The Annals of Applied Statistics

Year:

2011

Language:

english

File:

PDF, 3.02 MB

english, 2011

24

Spectral clustering for divide-and-conquer graph matching

Lyzinski, Vince, Sussman, Daniel L., Fishkind, Donniell E., Pao, Henry, Chen, Li, Vogelstein, Joshua T., Park, Youngser, Priebe, Carey E.

Journal:

Parallel Computing

Year:

2015

Language:

english

File:

PDF, 962 KB

english, 2015

25

Robust Vertex Classification

Chen, Li, Shen, Cencheng, Vogelstein, Joshua, Priebe, Carey E.

Journal:

IEEE Transactions on Pattern Analysis and Machine Intelligence

Year:

2015

Language:

english

File:

PDF, 1.15 MB

english, 2015

26

A Joint Graph Inference Case Study: the C.elegans Chemical and Electrical Connectomes

Chen, Li, Vogelstein, Joshua T., Lyzinski, Vince, Priebe, Carey E.

Journal:

Year:

2016

Language:

english

File:

PDF, 3.03 MB

english, 2016

27

Statistical Inference on Errorfully Observed Graphs

Priebe, Carey E., Sussman, Daniel L., Tang, Minh, Vogelstein, Joshua T.

Journal:

Journal of Computational and Graphical Statistics

Year:

2015

Language:

english

File:

PDF, 973 KB

english, 2015

28

SPIE Proceedings [SPIE SPIE Photonics Europe - Brussels, Belgium (Sunday 3 April 2016)] Optics, Photonics and Digital Technologies for Imaging Applications IV - Deformably registering and annotating whole CLARITY brains to an atlas via masked LDDMM

Schelkens, Peter, Ebrahimi, Touradj, Cristóbal, Gabriel, Truchetet, Frédéric, Saarikko, Pasi, Kutten, Kwame S., Vogelstein, Joshua T., Charon, Nicolas, Ye, Li, Deisseroth, Karl, Miller, Michael I.

Year:

2016

Language:

english

File:

PDF, 1.39 MB

english, 2016

29

Factors affecting characterization and localization of interindividual differences in functional connectivity using MRI

Airan, Raag D., Vogelstein, Joshua T., Pillai, Jay J., Caffo, Brian, Pekar, James J., Sair, Haris I.

Journal:

Human Brain Mapping

Year:

2016

Language:

english

File:

PDF, 626 KB

english, 2016

30

Nonparametric Bayes Modeling of Populations of Networks

Durante, Daniele, Dunson, David B., Vogelstein, Joshua T.

Journal:

Journal of the American Statistical Association

Year:

2016

Language:

english

File:

PDF, 3.78 MB

english, 2016

31

A Bayesian approach for inferring neuronal connectivity from calcium fluorescent imaging data

Mishchenko, Yuriy, Vogelstein, Joshua T., Paninski, Liam

Journal:

The Annals of Applied Statistics

Year:

2011

Language:

english

File:

PDF, 2.27 MB

english, 2011

32

An M-estimator for reduced-rank system identification

Chen, Shaojie, Liu, Kai, Yang, Yuguang, Xu, Yuting, Lee, Seonjoo, Lindquist, Martin, Caffo, Brian S., Vogelstein, Joshua T.

Journal:

Pattern Recognition Letters

Year:

2017

Language:

english

File:

PDF, 663 KB

english, 2017

33

Manifold matching using shortest-path distance and joint neighborhood selection

Shen, Cencheng, Vogelstein, Joshua T., Priebe, Carey E.

Journal:

Pattern Recognition Letters

Year:

2017

Language:

english

File:

PDF, 1.85 MB

english, 2017

34

Are mental properties supervenient on brain properties?

Vogelstein, Joshua T., Vogelstein, R. Jacob, Priebe, Carey E.

Journal:

Scientific Reports

Year:

2011

Language:

english

File:

PDF, 291 KB

english, 2011

35

Bisulfite-converted duplexes for the strand-specific detection and quantification of rare mutations

Mattox, Austin K., Wang, Yuxuan, Springer, Simeon, Cohen, Joshua D., Yegnasubramanian, Srinivasan, Nelson, William G., Kinzler, Kenneth W., Vogelstein, Bert, Papadopoulos, Nickolas

Journal:

Proceedings of the National Academy of Sciences

Year:

2017

Language:

english

File:

PDF, 733 KB

english, 2017

36

[ACM Press the 26th International Symposium - Washington, DC, USA (2017.06.26-2017.06.30)] Proceedings of the 26th International Symposium on High-Performance Parallel and Distributed Computing - HPDC '17 - knor

Mhembere, Disa, Zheng, Da, Priebe, Carey E., Vogelstein, Joshua T., Burns, Randal

Year:

2017

Language:

english

File:

PDF, 1.74 MB

english, 2017

37

Synaptic molecular imaging in spared and deprived columns of mouse barrel cortex with array tomography

Weiler, Nicholas C, Collman, Forrest, Vogelstein, Joshua T, Burns, Randal, Smith, Stephen J

Journal:

Scientific Data

Year:

2014

Language:

english

File:

PDF, 2.24 MB

english, 2014

38

A resource from 3D electron microscopy of hippocampal neuropil for user training and tool development

Harris, Kristen M., Spacek, Josef, Bell, Maria Elizabeth, Parker, Patrick H., Lindsey, Laurence F., Baden, Alexander D., Vogelstein, Joshua T., Burns, Randal

Journal:

Scientific Data

Year:

2015

Language:

english

File:

PDF, 9.46 MB

english, 2015

39

Selected reaction monitoring approach for validating peptide biomarkers

Wang, Qing, Zhang, Ming, Tomita, Tyler, Vogelstein, Joshua T., Zhou, Shibin, Papadopoulos, Nickolas, Kinzler, Kenneth W., Vogelstein, Bert

Journal:

Proceedings of the National Academy of Sciences

Year:

2017

Language:

english

File:

PDF, 830 KB

english, 2017

40

Rejoinder: Nonparametric Bayes Modeling of Populations of Networks

Durante, Daniele, Dunson, David B., Vogelstein, Joshua T.

Journal:

Journal of the American Statistical Association

Year:

2017

Language:

english

File:

PDF, 639 KB

english, 2017

41

A Comparison of Supervised Machine Learning Algorithms and Feature Vectors for MS Lesion Segmentation Using Multimodal Structural MRI

Sweeney, Elizabeth M., Vogelstein, Joshua T., Cuzzocreo, Jennifer L., Calabresi, Peter A., Reich, Daniel S., Crainiceanu, Ciprian M., Shinohara, Russell T., Draganski, Bogdan

Journal:

Year:

2014

Language:

english

File:

PDF, 3.21 MB

english, 2014

42

Fast Approximate Quadratic Programming for Graph Matching

Vogelstein, Joshua T., Conroy, John M., Lyzinski, Vince, Podrazik, Louis J., Kratzer, Steven G., Harley, Eric T., Fishkind, Donniell E., Vogelstein, R. Jacob, Priebe, Carey E., Muldoon, Mark R.

Journal:

Year:

2015

Language:

english

File:

PDF, 448 KB

english, 2015

43

A community-developed open-source computational ecosystem for big neuro data

Vogelstein, Joshua T., Perlman, Eric, Falk, Benjamin, Baden, Alex, Gray Roncal, William, Chandrashekhar, Vikram, Collman, Forrest, Seshamani, Sharmishtaa, Patsolic, Jesse L., Lillaney, Kunal, Kazhdan,

Journal:

Year:

2018

Language:

english

File:

PDF, 939 KB

english, 2018

44

Connectome Smoothing via Low-rank Approximations

Tang, Runze, Ketcha, Michael, Badea, Alexandra, Calabrese, Evan D., Margulies, Daniel S., Vogelstein, Joshua T., Priebe, Carey E., Sussman, Daniel L.

Journal:

IEEE Transactions on Medical Imaging

Year:

2018

Language:

english

File:

PDF, 2.33 MB

english, 2018

45

[IEEE 2018 IEEE 14th International Conference on e-Science (e-Science) - Amsterdam, Netherlands (2018.10.29-2018.11.1)] 2018 IEEE 14th International Conference on e-Science (e-Science) - Building NDStore Through Hierarchical Storage Management and Microservice Processing

Lillaney, Kunal, Kleissas, Dean, Eusman, Alexander, Perlman, Eric, Gray Roncal, William, Vogelstein, Joshua T., Burns, Randal

Year:

2018

Language:

english

File:

PDF, 676 KB

english, 2018

46

Accuracy of Saccades to Remembered Targets as a Function of Body Orientation in Space

Vogelstein, Joshua T., Snyder, Lawrence H., Angelaki, Dora E.

Journal:

Journal of Neurophysiology

Year:

2003

Language:

english

File:

PDF, 133 KB

english, 2003

47

On a two-truths phenomenon in spectral graph clustering

Priebe, Carey E., Park, Youngser, Vogelstein, Joshua T., Conroy, John M., Lyzinski, Vince, Tang, Minh, Athreya, Avanti, Cape, Joshua, Bridgeford, Eric

Journal:

Proceedings of the National Academy of Sciences

Year:

2019

Language:

english

File:

PDF, 1.05 MB

english, 2019

48

Thermal sensors improve wrist-worn position tracking

Son, Jake J., Clucas, Jon C., White, Curt, Krishnakumar, Anirudh, Vogelstein, Joshua T., Milham, Michael P., Klein, Arno

Journal:

npj Digital Medicine

Year:

2019

File:

PDF, 702 KB

2019

49

DoGNet: A deep architecture for synapse detection in multiplexed fluorescence images

Kulikov, Victor, Guo, Syuan-Ming, Stone, Matthew, Goodman, Allen, Carpenter, Anne, Bathe, Mark, Lempitsky, Victor, Vogelstein, Joshua

Journal:

PLoS Computational Biology

Year:

2019

File:

PDF, 8.52 MB

2019

50

Network dependence testing via diffusion maps and distance-based correlations

Lee, Youjin, Shen, Cencheng, Priebe, Carey E, Vogelstein, Joshua T

Journal:

Year:

2019

Language:

english

File:

PDF, 1.29 MB

english, 2019